peclet::amr::pybind Namespace Reference

Classes
class	DistributedOctree
class	Flow
class	FlowDiagnostics
class	Octree
class	Poisson

Typedefs
using	BO = amr::BlockOctree< 3 >
using	DO = amr::DistributedOctree< 3 >
using	Code = BO::Code
using	Coord = BO::Coord
using	DArray = nb::ndarray< double, nb::c_contig >
using	SpacingArg = std::variant< double, std::array< double, 3 > >

Functions
template<class T >
nb::ndarray< nb::numpy, T >	vec1 (std::vector< T > v)
template<class T >
nb::ndarray< nb::numpy, T >	vec2 (std::vector< T > v, std::size_t cols)
nb::ndarray< nb::numpy, double >	leafCenters (const BO &t, const amr::AmrGeometry< 3 > &geo)
nb::ndarray< nb::numpy, double >	leafSizes (const BO &t, const amr::AmrGeometry< 3 > &geo, int axis)
nb::ndarray< nb::numpy, std::int32_t >	leafLevels (const BO &t)
nb::ndarray< nb::numpy, std::uint64_t >	leafCodes (const BO &t)
nb::ndarray< nb::numpy, double >	vecToArray (std::vector< double > v)
std::vector< double >	asField (const BO &t, const DArray &field, const char *who)
std::array< double, 3 >	spacingsFromExtent (const std::array< double, 3 > &extent, const std::array< long, 3 > &cells)
double	spacingFromExtent (const std::array< double, 3 > &extent, const std::array< long, 3 > &cells)
std::array< double, 3 >	spacingOf (const SpacingArg &sp)
std::array< long, 3 >	rootCellsOf (const std::array< long, 3 > &cells, unsigned lmax, const char *who)
std::array< double, 3 >	resolveSpacing (const std::optional< SpacingArg > &spacing, const std::optional< std::array< double, 3 > > &extent, const std::array< long, 3 > &cells, const char *who)
template<class T >
void	bindOctreeCommon (nb::class_< T > &c)

Typedef Documentation

BO

using peclet::amr::pybind::BO = typedef amr::BlockOctree<3>

Definition at line 72 of file amr_bindings.cpp.

DO

using peclet::amr::pybind::DO = typedef amr::DistributedOctree<3>

Definition at line 73 of file amr_bindings.cpp.

Code

using peclet::amr::pybind::Code = typedef BO::Code

Definition at line 74 of file amr_bindings.cpp.

Coord

using peclet::amr::pybind::Coord = typedef BO::Coord

Definition at line 75 of file amr_bindings.cpp.

DArray

using peclet::amr::pybind::DArray = typedef nb::ndarray<double, nb::c_contig>

Definition at line 76 of file amr_bindings.cpp.

SpacingArg

using peclet::amr::pybind::SpacingArg = typedef std::variant<double, std::array<double, 3> >

Definition at line 200 of file amr_bindings.cpp.

Function Documentation

vec1()

template<class T >

nb::ndarray< nb::numpy, T > peclet::amr::pybind::vec1

(

std::vector< T >

v

)

Definition at line 81 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::size(), and peclet::amr::transferFieldGradients().

vec2()

template<class T >

nb::ndarray< nb::numpy, T > peclet::amr::pybind::vec2	(	std::vector< T >	v,
		std::size_t	cols
	)

Definition at line 86 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().

leafCenters()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::leafCenters	(	const BO &	t,
		const amr::AmrGeometry< 3 > &	geo
	)

Definition at line 93 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().

Referenced by peclet::amr::pybind::Octree::centers(), and peclet::amr::pybind::DistributedOctree::centers().

leafSizes()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::leafSizes	(	const BO &	t,
		const amr::AmrGeometry< 3 > &	geo,
		int	axis
	)

Definition at line 107 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().

Referenced by peclet::amr::pybind::Octree::sizes(), and peclet::amr::pybind::DistributedOctree::sizes().

leafLevels()

nb::ndarray< nb::numpy, std::int32_t > peclet::amr::pybind::leafLevels

(

const BO &

t

)

Definition at line 118 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().

Referenced by peclet::amr::pybind::Octree::levels(), and peclet::amr::pybind::DistributedOctree::levels().

leafCodes()

nb::ndarray< nb::numpy, std::uint64_t > peclet::amr::pybind::leafCodes

(

const BO &

t

)

Definition at line 127 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().

Referenced by peclet::amr::pybind::Octree::codes(), and peclet::amr::pybind::DistributedOctree::codes().

vecToArray()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::vecToArray

(

std::vector< double >

v

)

Definition at line 136 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().

Referenced by peclet::amr::pybind::Octree::adapt(), peclet::amr::pybind::DistributedOctree::adapt(), peclet::amr::pybind::Octree::lohner_indicator(), and peclet::amr::pybind::DistributedOctree::lohner_indicator().

asField()

std::vector< double > peclet::amr::pybind::asField	(	const BO &	t,
		const DArray &	field,
		const char *	who
	)

Definition at line 141 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().

Referenced by peclet::amr::pybind::Octree::adapt(), peclet::amr::pybind::DistributedOctree::adapt(), peclet::amr::pybind::DistributedOctree::face_neighbor_gather(), peclet::amr::pybind::Octree::lohner_indicator(), peclet::amr::pybind::DistributedOctree::lohner_indicator(), peclet::amr::pybind::Octree::write_vtu(), and peclet::amr::pybind::DistributedOctree::write_vtu().

spacingsFromExtent()

std::array< double, 3 > peclet::amr::pybind::spacingsFromExtent ( const std::array< double, 3 > &  extent, const std::array< long, 3 > &  cells  )

inline

Definition at line 167 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().

Referenced by resolveSpacing(), and spacingFromExtent().

spacingFromExtent()

double peclet::amr::pybind::spacingFromExtent ( const std::array< double, 3 > &  extent, const std::array< long, 3 > &  cells  )

inline

Definition at line 183 of file amr_bindings.cpp.

References spacingsFromExtent(), and peclet::amr::transferFieldGradients().

spacingOf()

std::array< double, 3 > peclet::amr::pybind::spacingOf ( const SpacingArg &  sp )

inline

Definition at line 201 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().

Referenced by resolveSpacing().

rootCellsOf()

std::array< long, 3 > peclet::amr::pybind::rootCellsOf ( const std::array< long, 3 > &  cells, unsigned  lmax, const char *  who  )

inline

Definition at line 209 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().

resolveSpacing()

std::array< double, 3 > peclet::amr::pybind::resolveSpacing ( const std::optional< SpacingArg > &  spacing, const std::optional< std::array< double, 3 > > &  extent, const std::array< long, 3 > &  cells, const char *  who  )

inline

Definition at line 228 of file amr_bindings.cpp.

References spacingOf(), spacingsFromExtent(), and peclet::amr::transferFieldGradients().

bindOctreeCommon()

template<class T >

void peclet::amr::pybind::bindOctreeCommon

(

nb::class_< T > &

c

)

Definition at line 888 of file amr_bindings.cpp.

References peclet::amr::transferFieldGradients().