peclet::amr::pybind::DistributedOctree Class Reference

Inheritance diagram for peclet::amr::pybind::DistributedOctree:

Public Member Functions
	DistributedOctree (std::array< long, 3 > global_root, unsigned lmax, std::array< double, 3 > origin, std::array< double, 3 > spacing, std::array< bool, 3 > periodic)
void	release () noexcept override
int	rank () const
int	size () const
Index	num_leaves () const
unsigned	lmax () const
std::array< double, 3 >	spacing () const
std::array< long, 3 >	cells () const
	The GLOBAL finest grid: global root cells * 2**lmax per axis (what the constructor took).
std::array< double, 3 >	extent () const
	The global box side lengths, cells * spacing.
std::array< double, 3 >	origin () const
	The global lower corner.
std::array< long, 3 >	block_origin_root () const
std::array< long, 3 >	block_brick () const
std::array< long, 3 >	global_root_size () const
nb::ndarray< nb::numpy, double >	centers () const
nb::ndarray< nb::numpy, double >	sizes (int axis) const
nb::ndarray< nb::numpy, std::int32_t >	levels () const
nb::ndarray< nb::numpy, std::uint64_t >	codes () const
Index	refine_to_sphere (std::array< double, 3 > center, double radius, unsigned target_level, double band, bool balance)
Index	refine_to_sdf (std::function< double(double, double, double)> sdf, unsigned target_level, double band, bool balance)
Index	balance ()
nb::ndarray< nb::numpy, double >	rebalance (DArray fields)
nb::ndarray< nb::numpy, double >	face_neighbor_gather (DArray field, double sentinel)
nb::ndarray< nb::numpy, double >	lohner_indicator (DArray field, double eps)
nb::ndarray< nb::numpy, double >	adapt (DArray field, double refine_thresh, double coarsen_thresh, unsigned finest_level, double eps, bool linear)
void	write_vtu (const std::string &path, const std::string &name, DArray field)
DO &	ref ()
	The wrapped core octree (the distributed Flow constructor hooks into it).

Detailed Description

Definition at line 631 of file amr_bindings.cpp.

Constructor & Destructor Documentation

DistributedOctree()

peclet::amr::pybind::DistributedOctree::DistributedOctree ( std::array< long, 3 >  global_root, unsigned  lmax, std::array< double, 3 >  origin, std::array< double, 3 >  spacing, std::array< bool, 3 >  periodic  )

inline

Definition at line 633 of file amr_bindings.cpp.

References peclet::amr::AmrGeometry< Dim >::h0, peclet::amr::DistributedOctree< Dim, Bits >::init(), lmax(), peclet::amr::AmrGeometry< Dim >::origin, origin(), spacing(), and peclet::amr::transferFieldGradients().

Member Function Documentation

release()

void peclet::amr::pybind::DistributedOctree::release ( )

inlineoverridenoexcept

Definition at line 641 of file amr_bindings.cpp.

rank()

int peclet::amr::pybind::DistributedOctree::rank ( ) const

inline

Definition at line 644 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::rank().

size()

int peclet::amr::pybind::DistributedOctree::size ( ) const

inline

Definition at line 645 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::size().

num_leaves()

Index peclet::amr::pybind::DistributedOctree::num_leaves ( ) const

inline

Definition at line 646 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::local(), and peclet::amr::BlockOctree< Dim, Bits >::numLeaves().

lmax()

unsigned peclet::amr::pybind::DistributedOctree::lmax ( ) const

inline

Definition at line 647 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::lmax().

Referenced by DistributedOctree().

spacing()

std::array< double, 3 > peclet::amr::pybind::DistributedOctree::spacing ( ) const

inline

Definition at line 648 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::h0(), and peclet::amr::transferFieldGradients().

Referenced by DistributedOctree().

cells()

std::array< long, 3 > peclet::amr::pybind::DistributedOctree::cells ( ) const

inline

The GLOBAL finest grid: global root cells * 2**lmax per axis (what the constructor took).

Definition at line 653 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::globalFineSize(), and peclet::amr::transferFieldGradients().

Referenced by extent().

extent()

std::array< double, 3 > peclet::amr::pybind::DistributedOctree::extent ( ) const

inline

The global box side lengths, cells * spacing.

Definition at line 658 of file amr_bindings.cpp.

References cells(), peclet::amr::DistributedOctree< Dim, Bits >::h0(), and peclet::amr::transferFieldGradients().

origin()

std::array< double, 3 > peclet::amr::pybind::DistributedOctree::origin ( ) const

inline

The global lower corner.

Definition at line 664 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::globalGeometry(), and peclet::amr::transferFieldGradients().

Referenced by DistributedOctree().

block_origin_root()

std::array< long, 3 > peclet::amr::pybind::DistributedOctree::block_origin_root ( ) const

inline

Definition at line 668 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::blockOriginRoot().

block_brick()

std::array< long, 3 > peclet::amr::pybind::DistributedOctree::block_brick ( ) const

inline

Definition at line 672 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::blockBrick().

global_root_size()

std::array< long, 3 > peclet::amr::pybind::DistributedOctree::global_root_size ( ) const

inline

Definition at line 676 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::globalRootSize().

centers()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::DistributedOctree::centers ( ) const

inline

Definition at line 682 of file amr_bindings.cpp.

References peclet::amr::pybind::leafCenters(), peclet::amr::DistributedOctree< Dim, Bits >::local(), and peclet::amr::DistributedOctree< Dim, Bits >::localGeometry().

sizes()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::DistributedOctree::sizes ( int  axis ) const

inline

Definition at line 685 of file amr_bindings.cpp.

References peclet::amr::pybind::leafSizes(), peclet::amr::DistributedOctree< Dim, Bits >::local(), and peclet::amr::DistributedOctree< Dim, Bits >::localGeometry().

levels()

nb::ndarray< nb::numpy, std::int32_t > peclet::amr::pybind::DistributedOctree::levels ( ) const

inline

Definition at line 688 of file amr_bindings.cpp.

References peclet::amr::pybind::leafLevels(), and peclet::amr::DistributedOctree< Dim, Bits >::local().

codes()

nb::ndarray< nb::numpy, std::uint64_t > peclet::amr::pybind::DistributedOctree::codes ( ) const

inline

Definition at line 689 of file amr_bindings.cpp.

References peclet::amr::pybind::leafCodes(), and peclet::amr::DistributedOctree< Dim, Bits >::local().

refine_to_sphere()

Index peclet::amr::pybind::DistributedOctree::refine_to_sphere ( std::array< double, 3 >  center, double  radius, unsigned  target_level, double  band, bool  balance  )

inline

Definition at line 694 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::balance(), balance(), peclet::amr::DistributedOctree< Dim, Bits >::local(), peclet::amr::DistributedOctree< Dim, Bits >::localGeometry(), peclet::amr::refineToSdf(), and peclet::amr::transferFieldGradients().

refine_to_sdf()

Index peclet::amr::pybind::DistributedOctree::refine_to_sdf ( std::function< double(double, double, double)>  sdf, unsigned  target_level, double  band, bool  balance  )

inline

Definition at line 710 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::balance(), balance(), peclet::amr::DistributedOctree< Dim, Bits >::local(), peclet::amr::DistributedOctree< Dim, Bits >::localGeometry(), peclet::amr::refineToSdf(), and peclet::amr::transferFieldGradients().

balance()

Index peclet::amr::pybind::DistributedOctree::balance ( )

inline

Definition at line 722 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::balance().

Referenced by refine_to_sdf(), and refine_to_sphere().

rebalance()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::DistributedOctree::rebalance ( DArray  fields )

inline

Definition at line 729 of file amr_bindings.cpp.

References peclet::amr::DistributedOctree< Dim, Bits >::local(), peclet::amr::BlockOctree< Dim, Bits >::numLeaves(), peclet::amr::DistributedOctree< Dim, Bits >::rebalance(), and peclet::amr::transferFieldGradients().

face_neighbor_gather()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::DistributedOctree::face_neighbor_gather ( DArray  field, double  sentinel  )

inline

Definition at line 755 of file amr_bindings.cpp.

References peclet::amr::pybind::asField(), peclet::amr::DistributedOctree< Dim, Bits >::faceNeighborGather(), peclet::amr::DistributedOctree< Dim, Bits >::local(), and peclet::amr::transferFieldGradients().

lohner_indicator()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::DistributedOctree::lohner_indicator ( DArray  field, double  eps  )

inline

Definition at line 765 of file amr_bindings.cpp.

References peclet::amr::pybind::asField(), peclet::amr::DistributedOctree< Dim, Bits >::local(), peclet::amr::lohnerIndicatorDistributed(), peclet::amr::transferFieldGradients(), and peclet::amr::pybind::vecToArray().

adapt()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::DistributedOctree::adapt ( DArray  field, double  refine_thresh, double  coarsen_thresh, unsigned  finest_level, double  eps, bool  linear  )

inline

Definition at line 774 of file amr_bindings.cpp.

References peclet::amr::pybind::asField(), peclet::amr::distributedAdapt(), peclet::amr::DistributedOctree< Dim, Bits >::local(), peclet::amr::transferFieldGradients(), and peclet::amr::pybind::vecToArray().

write_vtu()

void peclet::amr::pybind::DistributedOctree::write_vtu ( const std::string &  path, const std::string &  name, DArray  field  )

inline

Definition at line 783 of file amr_bindings.cpp.

References peclet::amr::pybind::asField(), peclet::amr::DistributedOctree< Dim, Bits >::local(), peclet::amr::DistributedOctree< Dim, Bits >::localGeometry(), peclet::amr::transferFieldGradients(), and peclet::amr::writeVtu().

ref()

DO & peclet::amr::pybind::DistributedOctree::ref ( )

inline

The wrapped core octree (the distributed Flow constructor hooks into it).

Definition at line 789 of file amr_bindings.cpp.

Referenced by peclet::amr::pybind::Flow::Flow().

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The documentation for this class was generated from the following file:

• amr_bindings.cpp