Inheritance diagram for peclet::amr::pybind::Octree:

Public Member Functions
	Octree (std::array< long, 3 > root, unsigned lmax, std::array< double, 3 > origin, std::array< double, 3 > spacing)

void	release () noexcept override

Index	num_leaves () const

unsigned	lmax () const

std::array< double, 3 >	origin () const

std::array< long, 3 >	cells () const
	The FINEST-level cell counts the block resolves: root cells * 2**lmax per axis.

std::array< double, 3 >	extent () const
	The block's physical side lengths, cells * spacing.

std::array< double, 3 >	spacing () const

bool	is_balanced () const

nb::ndarray< nb::numpy, double >	centers () const

nb::ndarray< nb::numpy, double >	sizes (int axis) const

nb::ndarray< nb::numpy, std::int32_t >	levels () const

nb::ndarray< nb::numpy, std::uint64_t >	codes () const

Index	find (std::array< double, 3 > x) const

Index	refine_to_sphere (std::array< double, 3 > center, double radius, unsigned target_level, double band, bool balance)

Index	refine_to_sdf (std::function< double(double, double, double)> sdf, unsigned target_level, double band, bool balance)

Index	refine_to_sdf_graded (std::function< double(double, double, double)> sdf, std::function< unsigned(double, double, double)> target_level, double band, bool balance)

Index	refine_to_gap_floor (std::function< double(double, double, double)> sdf, std::function< double(double, double, double)> gap, unsigned coarsest_level, double n, double band, bool balance)

bool	refine_leaf (Index i)

Index	balance ()

const BO &	octreeRef () const

const amr::AmrGeometry< 3 > &	geoRef () const

nb::ndarray< nb::numpy, double >	lohner_indicator (DArray field, double eps)

nb::ndarray< nb::numpy, double >	adapt (DArray field, double refine_thresh, double coarsen_thresh, unsigned finest_level, double eps, bool linear)

void	write_vtu (const std::string &path, const std::string &name, DArray field)

Detailed Description

Definition at line 246 of file amr_bindings.cpp.

Constructor & Destructor Documentation

◆ Octree()

peclet::amr::pybind::Octree::Octree	(	std::array< long, 3 >	root,
		unsigned	lmax,
		std::array< double, 3 >	origin,
		std::array< double, 3 >	spacing
	)

inline

Definition at line 248 of file amr_bindings.cpp.

References peclet::amr::AmrGeometry< Dim >::h0, peclet::amr::BlockOctree< Dim, Bits >::init(), lmax(), peclet::amr::AmrGeometry< Dim >::origin, origin(), spacing(), and peclet::amr::transferFieldGradients().

Member Function Documentation

◆ release()

void peclet::amr::pybind::Octree::release ( )

inlineoverridenoexcept

Definition at line 254 of file amr_bindings.cpp.

◆ num_leaves()

Index peclet::amr::pybind::Octree::num_leaves ( ) const

inline

Definition at line 257 of file amr_bindings.cpp.

References peclet::amr::BlockOctree< Dim, Bits >::numLeaves().

◆ lmax()

unsigned peclet::amr::pybind::Octree::lmax ( ) const

inline

Definition at line 258 of file amr_bindings.cpp.

References peclet::amr::BlockOctree< Dim, Bits >::lmax().

Referenced by Octree().

◆ origin()

std::array< double, 3 > peclet::amr::pybind::Octree::origin ( ) const

inline

Definition at line 259 of file amr_bindings.cpp.

References peclet::amr::AmrGeometry< Dim >::origin.

Referenced by Octree().

◆ cells()

std::array< long, 3 > peclet::amr::pybind::Octree::cells ( ) const

inline

The FINEST-level cell counts the block resolves: root cells * 2**lmax per axis.

Definition at line 261 of file amr_bindings.cpp.

References peclet::amr::BlockOctree< Dim, Bits >::brick(), peclet::amr::BlockOctree< Dim, Bits >::lmax(), and peclet::amr::transferFieldGradients().

Referenced by extent().

◆ extent()

std::array< double, 3 > peclet::amr::pybind::Octree::extent ( ) const

inline

The block's physical side lengths, cells * spacing.

Definition at line 267 of file amr_bindings.cpp.

References cells(), peclet::amr::AmrGeometry< Dim >::h0, and peclet::amr::transferFieldGradients().

◆ spacing()

std::array< double, 3 > peclet::amr::pybind::Octree::spacing ( ) const

inline

Definition at line 271 of file amr_bindings.cpp.

References peclet::amr::AmrGeometry< Dim >::h0.

Referenced by Octree().

◆ is_balanced()

bool peclet::amr::pybind::Octree::is_balanced ( ) const

inline

Definition at line 272 of file amr_bindings.cpp.

References peclet::amr::BlockOctree< Dim, Bits >::isBalanced().

◆ centers()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::Octree::centers ( ) const

inline

Definition at line 274 of file amr_bindings.cpp.

References peclet::amr::pybind::leafCenters().

◆ sizes()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::Octree::sizes ( int axis ) const

inline

Definition at line 275 of file amr_bindings.cpp.

References peclet::amr::pybind::leafSizes().

◆ levels()

nb::ndarray< nb::numpy, std::int32_t > peclet::amr::pybind::Octree::levels ( ) const

inline

Definition at line 276 of file amr_bindings.cpp.

References peclet::amr::pybind::leafLevels().

◆ codes()

nb::ndarray< nb::numpy, std::uint64_t > peclet::amr::pybind::Octree::codes ( ) const

inline

Definition at line 277 of file amr_bindings.cpp.

References peclet::amr::pybind::leafCodes().

◆ find()

Index peclet::amr::pybind::Octree::find ( std::array< double, 3 > x ) const

inline

Definition at line 281 of file amr_bindings.cpp.

References peclet::amr::BlockOctree< Dim, Bits >::find(), peclet::amr::AmrGeometry< Dim >::h0, peclet::amr::AmrGeometry< Dim >::origin, and peclet::amr::transferFieldGradients().

◆ refine_to_sphere()

Index peclet::amr::pybind::Octree::refine_to_sphere	(	std::array< double, 3 >	center,
		double	radius,
		unsigned	target_level,
		double	band,
		bool	balance
	)

inline

Definition at line 294 of file amr_bindings.cpp.

References balance(), peclet::amr::refineToSdf(), and peclet::amr::transferFieldGradients().

◆ refine_to_sdf()

Index peclet::amr::pybind::Octree::refine_to_sdf	(	std::function< double(double, double, double)>	sdf,
		unsigned	target_level,
		double	band,
		bool	balance
	)

inline

Definition at line 303 of file amr_bindings.cpp.

References balance(), peclet::amr::refineToSdf(), and peclet::amr::transferFieldGradients().

◆ refine_to_sdf_graded()

Index peclet::amr::pybind::Octree::refine_to_sdf_graded	(	std::function< double(double, double, double)>	sdf,
		std::function< unsigned(double, double, double)>	target_level,
		double	band,
		bool	balance
	)

inline

Definition at line 312 of file amr_bindings.cpp.

References balance(), peclet::amr::refineToSdfGraded(), and peclet::amr::transferFieldGradients().

◆ refine_to_gap_floor()

Index peclet::amr::pybind::Octree::refine_to_gap_floor	(	std::function< double(double, double, double)>	sdf,
		std::function< double(double, double, double)>	gap,
		unsigned	coarsest_level,
		double	n,
		double	band,
		bool	balance
	)

inline

Definition at line 322 of file amr_bindings.cpp.

References balance(), peclet::amr::AmrGeometry< Dim >::hMax(), peclet::amr::refineToSdfGraded(), and peclet::amr::transferFieldGradients().

◆ refine_leaf()

bool peclet::amr::pybind::Octree::refine_leaf ( Index i )

inline

Definition at line 332 of file amr_bindings.cpp.

References peclet::amr::BlockOctree< Dim, Bits >::refineLeaf(), and peclet::amr::transferFieldGradients().

◆ balance()

Index peclet::amr::pybind::Octree::balance ( )

inline

Definition at line 335 of file amr_bindings.cpp.

References peclet::amr::BlockOctree< Dim, Bits >::balance2to1().

Referenced by refine_to_gap_floor(), refine_to_sdf(), refine_to_sdf_graded(), and refine_to_sphere().

◆ octreeRef()

const BO & peclet::amr::pybind::Octree::octreeRef ( ) const

inline

Definition at line 338 of file amr_bindings.cpp.

◆ geoRef()

const amr::AmrGeometry< 3 > & peclet::amr::pybind::Octree::geoRef ( ) const

inline

Definition at line 339 of file amr_bindings.cpp.

◆ lohner_indicator()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::Octree::lohner_indicator	(	DArray	field,
		double	eps
	)

inline

Definition at line 344 of file amr_bindings.cpp.

References peclet::amr::pybind::asField(), peclet::amr::lohnerIndicator(), peclet::amr::transferFieldGradients(), and peclet::amr::pybind::vecToArray().

◆ adapt()

nb::ndarray< nb::numpy, double > peclet::amr::pybind::Octree::adapt	(	DArray	field,
		double	refine_thresh,
		double	coarsen_thresh,
		unsigned	finest_level,
		double	eps,
		bool	linear
	)

inline

Definition at line 353 of file amr_bindings.cpp.

References peclet::amr::adapt(), peclet::amr::pybind::asField(), peclet::amr::transferFieldGradients(), and peclet::amr::pybind::vecToArray().

◆ write_vtu()

void peclet::amr::pybind::Octree::write_vtu	(	const std::string &	path,
		const std::string &	name,
		DArray	field
	)

inline

Definition at line 363 of file amr_bindings.cpp.

References peclet::amr::pybind::asField(), peclet::amr::transferFieldGradients(), and peclet::amr::writeVtu().

The documentation for this class was generated from the following file:

amr_bindings.cpp

Public Member Functions

Detailed Description

Constructor & Destructor Documentation

◆ Octree()

Member Function Documentation

◆ release()

◆ num_leaves()

◆ lmax()

◆ origin()

◆ cells()

◆ extent()

◆ spacing()

◆ is_balanced()

◆ centers()

◆ sizes()

◆ levels()

◆ codes()

◆ find()

◆ refine_to_sphere()

◆ refine_to_sdf()

◆ refine_to_sdf_graded()

◆ refine_to_gap_floor()

◆ refine_leaf()

◆ balance()

◆ octreeRef()

◆ geoRef()

◆ lohner_indicator()

◆ adapt()

◆ write_vtu()