voro_bindings_common.hpp File Reference

Internal helpers shared by the translation units of the peclet.voro nanobind module. More...

#include <nanobind/nanobind.h>
#include <nanobind/ndarray.h>
#include <nanobind/stl/array.h>
#include <nanobind/stl/optional.h>
#include <nanobind/stl/string.h>
#include <algorithm>
#include <array>
#include <cmath>
#include <cstdio>
#include <deque>
#include <Kokkos_Core.hpp>
#include <optional>
#include <set>
#include <stdexcept>
#include <string>
#include <type_traits>
#include <variant>
#include <vector>
#include "peclet/core/common/view.hpp"
#include "peclet/core/geom/scene_builder.hpp"
#include "peclet/core/python/kokkos_teardown.hpp"
#include "peclet/core/python/ndarray_interop.hpp"
#include "peclet/voro/params.hpp"
#include "peclet/voro/sdf.hpp"

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Classes
struct	peclet::voro::pybind::SceneHolder
struct	peclet::voro::pybind::OptimizeResult
struct	peclet::voro::pybind::InterfaceResult

Namespaces
namespace	peclet
namespace	peclet::voro
	Device-native Voronoi tessellation, geometry and finite-volume physics.
namespace	peclet::voro::pybind
namespace	peclet::voro::pybind::defaults

Typedefs
using	real_t = double
using	DView = Kokkos::View< real_t *, peclet::core::MemSpace >
using	peclet::voro::pybind::NoSdfT = peclet::voro::NoSdf
using	peclet::voro::pybind::SceneT = peclet::voro::SdfScene< real_t >
using	peclet::voro::pybind::Mem = peclet::core::MemSpace

Functions
const char *	peclet::voro::pybind::doc (std::string s)
std::string	peclet::voro::pybind::fmt (double v)
std::string	peclet::voro::pybind::fmt (int v)
std::vector< real_t >	peclet::voro::pybind::flatten3 (nb::ndarray< real_t, nb::c_contig > a)
std::vector< real_t >	peclet::voro::pybind::flatten1 (nb::ndarray< real_t, nb::c_contig > a)
real_t	peclet::voro::pybind::cubicExtent (std::array< real_t, 3 > e, const char *fn)
SceneHolder	peclet::voro::pybind::makeSceneHolder (nb::ndarray< int, nb::c_contig > node_ints, nb::ndarray< real_t, nb::c_contig > node_reals, int root, real_t grad_h)
void	peclet::voro::pybind::checkDomain (const char *cls, std::array< real_t, 3 > extent, std::array< real_t, 3 > origin, std::array< bool, 3 > periodic)
bool	peclet::voro::pybind::parseWallMode (const std::string &mode)
nb::ndarray< nb::numpy, real_t >	peclet::voro::pybind::toNumpy3 (std::vector< real_t > v)
nb::ndarray< nb::numpy, real_t >	peclet::voro::pybind::toNumpy1 (std::vector< real_t > v)
void	peclet::voro::pybind::bindOptimizers (nb::module_ &m)
void	peclet::voro::pybind::bindPore (nb::module_ &m)
void	peclet::voro::pybind::bindTessellation (nb::module_ &m)
void	peclet::voro::pybind::bindFlow (nb::module_ &m)
void	peclet::voro::pybind::bindSimulation (nb::module_ &m)

Variables
constexpr double	peclet::voro::pybind::defaults::kSdfGradientStep = 1e-5
constexpr double	peclet::voro::pybind::defaults::kWallSkin = 0.0
constexpr int	peclet::voro::pybind::defaults::kOptimizerSearchWindow = 5
constexpr int	peclet::voro::pybind::defaults::kPoreSearchWindow = 6
constexpr int	peclet::voro::pybind::defaults::kOptimizerMaxIter = 60
constexpr int	peclet::voro::pybind::defaults::kPoreMaxIter = 80
constexpr double	peclet::voro::pybind::defaults::kOptimizerTolerance = 1e-9
constexpr int	peclet::voro::pybind::defaults::kPoreCgIters = 400
constexpr double	peclet::voro::pybind::defaults::kInterfaceSigma = 1.0
constexpr int	peclet::voro::pybind::defaults::kPoreMaxBins = 96
constexpr double	peclet::voro::pybind::defaults::kDistributedRcut = 3.5
constexpr long	peclet::voro::pybind::defaults::kDistributedCells = 16
constexpr const char *	peclet::voro::pybind::kWallModeList = "'exact', 'skin'"

Detailed Description

Internal helpers shared by the translation units of the peclet.voro nanobind module.

Not an installed header: src/ only. Everything here is host-side glue (array conversion, the domain/mode contract checks, the device SDF scene holder, the typed optimiser results) — no device kernel is instantiated by including it.

Typedef Documentation

DView

using DView = Kokkos::View<real_t*, peclet::core::MemSpace>

real_t

using real_t = double