peclet::voro::pybind Namespace Reference

Namespaces
namespace	defaults

Classes
class	Flow
struct	FlowDiagnostics
struct	InterfaceResult
struct	OptimizeResult
struct	PoreReconstructor
struct	SceneHolder
class	Sim
struct	SimDiagnostics
class	Tess
struct	TessDiagnostics

Typedefs
using	NoSdfT = peclet::voro::NoSdf
using	SceneT = peclet::voro::SdfScene< real_t >
using	Mem = peclet::core::MemSpace
template<bool W, class S >
using	MT = peclet::voro::MovingTessellation< real_t, defaults::kMaxPlanes, defaults::kMaxTriangles, W, S >
using	MtVariant = std::variant< MT< false, NoSdfT >, MT< true, NoSdfT >, MT< false, SceneT >, MT< true, SceneT > >
using	PoreCell = peclet::voro::ConvexCell< real_t, defaults::kPoreMaxPlanes, defaults::kPoreMaxTriangles >
using	HView = Kokkos::View< real_t *, Kokkos::HostSpace >
using	HostSpheresSdf = peclet::voro::SdfSpheres< real_t, Kokkos::HostSpace >

Functions
const char *	doc (std::string s)
std::string	fmt (double v)
std::string	fmt (int v)
std::vector< real_t >	flatten3 (nb::ndarray< real_t, nb::c_contig > a)
std::vector< real_t >	flatten1 (nb::ndarray< real_t, nb::c_contig > a)
real_t	cubicExtent (std::array< real_t, 3 > e, const char *fn)
SceneHolder	makeSceneHolder (nb::ndarray< int, nb::c_contig > node_ints, nb::ndarray< real_t, nb::c_contig > node_reals, int root, real_t grad_h)
void	checkDomain (const char *cls, std::array< real_t, 3 > extent, std::array< real_t, 3 > origin, std::array< bool, 3 > periodic)
bool	parseWallMode (const std::string &mode)
nb::ndarray< nb::numpy, real_t >	toNumpy3 (std::vector< real_t > v)
nb::ndarray< nb::numpy, real_t >	toNumpy1 (std::vector< real_t > v)
void	bindOptimizers (nb::module_ &m)
void	bindPore (nb::module_ &m)
void	bindTessellation (nb::module_ &m)
void	bindFlow (nb::module_ &m)
void	bindSimulation (nb::module_ &m)
peclet::voro::Precond	parseMethod (const std::string &m, const char *fn)
OptimizeResult	makeOptimizeResult (std::vector< real_t > pos, std::optional< std::vector< real_t > > w, const peclet::voro::OtResult &R)
nb::dict	repairStatsDict (const peclet::voro::RepairStats &st)
peclet::voro::SdfSpheres< real_t >	makeSpheresSdf (nb::ndarray< real_t, nb::c_contig > centers, nb::ndarray< real_t, nb::c_contig > radii, real_t L, DView &cenHold, DView &radHold)
HostSpheresSdf	makeSpheresSdfHost (nb::ndarray< real_t, nb::c_contig > centers, nb::ndarray< real_t, nb::c_contig > radii, real_t L, HView &cenHold, HView &radHold)

Variables
constexpr const char *	kWallModeList = "'exact', 'skin'"
constexpr const char *	kMethodList = "'jacobi', 'colored_gs', 'graphamg', 'steepest'"
constexpr const char *	kLayoutList = "'collocated', 'covolume'"

Typedef Documentation

HostSpheresSdf

using peclet::voro::pybind::HostSpheresSdf = typedef peclet::voro::SdfSpheres<real_t, Kokkos::HostSpace>

HView

using peclet::voro::pybind::HView = typedef Kokkos::View<real_t*, Kokkos::HostSpace>

Mem

using peclet::voro::pybind::Mem = typedef peclet::core::MemSpace

MT

template<bool W, class S >

using peclet::voro::pybind::MT = typedef peclet::voro::MovingTessellation<real_t, defaults::kMaxPlanes, defaults::kMaxTriangles, W, S>

MtVariant

using peclet::voro::pybind::MtVariant = typedef std::variant<MT<false, NoSdfT>, MT<true, NoSdfT>, MT<false, SceneT>, MT<true, SceneT> >

NoSdfT

using peclet::voro::pybind::NoSdfT = typedef peclet::voro::NoSdf

PoreCell

using peclet::voro::pybind::PoreCell = typedef peclet::voro::ConvexCell<real_t, defaults::kPoreMaxPlanes, defaults::kPoreMaxTriangles>

SceneT

using peclet::voro::pybind::SceneT = typedef peclet::voro::SdfScene<real_t>

Function Documentation

bindFlow()

void peclet::voro::pybind::bindFlow

(

nb::module_ &

m

)

bindOptimizers()

void peclet::voro::pybind::bindOptimizers

(

nb::module_ &

m

)

bindPore()

void peclet::voro::pybind::bindPore

(

nb::module_ &

m

)

bindSimulation()

void peclet::voro::pybind::bindSimulation

(

nb::module_ &

m

)

bindTessellation()

void peclet::voro::pybind::bindTessellation

(

nb::module_ &

m

)

checkDomain()

void peclet::voro::pybind::checkDomain ( const char *  cls, std::array< real_t, 3 >  extent, std::array< real_t, 3 >  origin, std::array< bool, 3 >  periodic  )

inline

cubicExtent()

real_t peclet::voro::pybind::cubicExtent ( std::array< real_t, 3 >  e, const char *  fn  )

inline

doc()

const char * peclet::voro::pybind::doc ( std::string  s )

inline

flatten1()

std::vector< real_t > peclet::voro::pybind::flatten1 ( nb::ndarray< real_t, nb::c_contig >  a )

inline

flatten3()

std::vector< real_t > peclet::voro::pybind::flatten3 ( nb::ndarray< real_t, nb::c_contig >  a )

inline

fmt() [1/2]

std::string peclet::voro::pybind::fmt ( double  v )

inline

fmt() [2/2]

std::string peclet::voro::pybind::fmt ( int  v )

inline

makeOptimizeResult()

OptimizeResult peclet::voro::pybind::makeOptimizeResult ( std::vector< real_t >  pos, std::optional< std::vector< real_t > >  w, const peclet::voro::OtResult &  R  )

inline

makeSceneHolder()

SceneHolder peclet::voro::pybind::makeSceneHolder ( nb::ndarray< int, nb::c_contig >  node_ints, nb::ndarray< real_t, nb::c_contig >  node_reals, int  root, real_t  grad_h  )

inline

makeSpheresSdf()

peclet::voro::SdfSpheres< real_t > peclet::voro::pybind::makeSpheresSdf ( nb::ndarray< real_t, nb::c_contig >  centers, nb::ndarray< real_t, nb::c_contig >  radii, real_t  L, DView &  cenHold, DView &  radHold  )

inline

makeSpheresSdfHost()

HostSpheresSdf peclet::voro::pybind::makeSpheresSdfHost ( nb::ndarray< real_t, nb::c_contig >  centers, nb::ndarray< real_t, nb::c_contig >  radii, real_t  L, HView &  cenHold, HView &  radHold  )

inline

parseMethod()

peclet::voro::Precond peclet::voro::pybind::parseMethod ( const std::string &  m, const char *  fn  )

inline

parseWallMode()

bool peclet::voro::pybind::parseWallMode ( const std::string &  mode )

inline

repairStatsDict()

nb::dict peclet::voro::pybind::repairStatsDict ( const peclet::voro::RepairStats &  st )

inline

toNumpy1()

nb::ndarray< nb::numpy, real_t > peclet::voro::pybind::toNumpy1 ( std::vector< real_t >  v )

inline

toNumpy3()

nb::ndarray< nb::numpy, real_t > peclet::voro::pybind::toNumpy3 ( std::vector< real_t >  v )

inline

Variable Documentation

kLayoutList

constexpr const char* peclet::voro::pybind::kLayoutList = "'collocated', 'covolume'"

constexpr

kMethodList

constexpr const char* peclet::voro::pybind::kMethodList = "'jacobi', 'colored_gs', 'graphamg', 'steepest'"

constexpr

kWallModeList

constexpr const char* peclet::voro::pybind::kWallModeList = "'exact', 'skin'"

constexpr